flotilla.data_model.metadata module

class flotilla.data_model.metadata.MetaData(data, phenotype_order=None, phenotype_to_color=None, phenotype_to_marker=None, phenotype_col='phenotype', pooled_col='pooled', outlier_col='outlier', predictor_config_manager=None, minimum_sample_subset=10)[source]

Bases: flotilla.data_model.base.BaseData

n_phenotypes[source]
phenotype_color_order[source]
phenotype_order[source]
phenotype_series[source]
phenotype_to_color[source]
phenotype_to_marker[source]
phenotype_transitions[source]
sample_id_to_color[source]
sample_id_to_phenotype[source]
sample_subsets[source]
unique_phenotypes[source]
Olga B. Botvinnik is funded by the NDSEG fellowship and is a NumFOCUS John Hunter Technology Fellow.
Michael T. Lovci was partially funded by a fellowship from Genentech.
Partially funded by NIH grants NS075449 and HG004659 and CIRM grants RB4-06045 and TR3-05676 to Gene Yeo.