flotilla.data_model.quality_control module

class flotilla.data_model.quality_control.MappingStatsData(data, number_mapped_col, min_reads=500000.0, predictor_config_manager=None)[source]

Bases: flotilla.data_model.base.BaseData

Constructor for mapping statistics data from STAR

Constructor for MappingStatsData

Parameters:data, sample_descriptors
number_mapped[source]
too_few_mapped[source]
Olga B. Botvinnik is funded by the NDSEG fellowship and is a NumFOCUS John Hunter Technology Fellow.
Michael T. Lovci was partially funded by a fellowship from Genentech.
Partially funded by NIH grants NS075449 and HG004659 and CIRM grants RB4-06045 and TR3-05676 to Gene Yeo.