flotilla.datapackage module¶

Functions to deal with creation and loading of datapackages

flotilla.datapackage.check_if_already_downloaded(url, datapackage_name=None, download_dir='/home/travis/flotilla_projects')[source]¶

If a url filename has already been downloaded, don’t download it again.

Parameters:	url : str HTTP url of a file you want to downlaod
Returns:	filename : str Location of the file on your system

flotilla.datapackage.datapackage_url_to_dict(datapackage_url)[source]¶

flotilla.datapackage.make_study_datapackage(study_name, metadata, expression_data=None, splicing_data=None, spikein_data=None, mapping_stats_data=None, title='', sources='', license=None, species=None, flotilla_dir='/home/travis/flotilla_projects', metadata_kws=None, expression_kws=None, splicing_kws=None, spikein_kws=None, mapping_stats_kws=None, version=None, expression_feature_kws=None, expression_feature_data=None, splicing_feature_data=None, splicing_feature_kws=None, gene_ontology=None, supplemental_kws=None, host='https://s3-us-west-2.amazonaws.com/', host_destination='flotilla-projects/')[source]¶

Example code for making a datapackage for a Study

flotilla.datapackage.name_to_resource(datapackage, name)[source]¶

Get resource with specified name in the datapackage