| Study.plot_gene(feature_id[, sample_subset, ...]) | |
| Study.plot_event(feature_id[, ...]) | Plot the violinplot and NMF transitions of a splicing event | 
| Study.interactive_pca([data_types, ...]) | |
| Study.interactive_classifier([data_types, ...]) | |
| Study.interactive_graph([data_types, ...]) | |
| Study.interactive_lavalamp_pooled_inconsistent([...]) | |
| Study.interactive_choose_outliers([...]) | |
| Study.interactive_reset_outliers() | User selects from columns that start with ‘outlier_‘ to merge | 
| Study.plot_pca([data_type, x_pc, y_pc, ...]) | Performs DataFramePCA on both expression and splicing study_data | 
| Study.plot_classifier(trait[, ...]) | Plot a predictor for the specified data type and trait(s) | 
| Study.plot_graph([data_type, sample_subset, ...]) | Plot the graph (network) of these data | 
| Study.plot_lavalamp_pooled_inconsistent([...]) |