Flotilla
0.2.8dev
Tutorial
Gallery
YeoLab@UCSD
Site
flotilla
flotilla package
What’s new in the package
v0.2.8 (........)
v0.2.7 (April 20th, 2015)
v0.2.6 (April 10th, 2015)
v0.2.5 (March 3rd, 2015)
v0.2.4 (November 23rd, 2014)
v0.2.3 (November 17th, 2014)
v0.2.2 (November 7th, 2014)
v0.2.1 (November 6th, 2014)
v0.2.0 (November 5th, 2014)
OS X Installation instructions
Create a flotilla sandbox
Install and update all packages in your environment
Old OSX Installation instructions
Docker Instructions
API Reference
General use plots
Interactive plots
Machine learning plots
Splicing-specific plots
Create your very own datapackage!
Flotilla tutorial
Install flotilla
Create a datapackage
Computing on splicing data
Day to day helpful tips
Recreated papers
Page
All modules for which code is available
flotilla
flotilla.compute.decomposition
flotilla.compute.expression
flotilla.compute.generic
flotilla.compute.infotheory
flotilla.compute.network
flotilla.compute.outlier
flotilla.compute.predict
flotilla.compute.splicing
flotilla.data_model
flotilla.data_model.base
flotilla.data_model.expression
flotilla.data_model.gene_ontology
flotilla.data_model.metadata
flotilla.data_model.quality_control
flotilla.data_model.splicing
flotilla.data_model.study
flotilla.data_model.supplemental
flotilla.datapackage
flotilla.external.combat
flotilla.test.conftest
flotilla.test.test_embark
flotilla.test.test_util
flotilla.util
flotilla.visualize
flotilla.visualize.decomposition
flotilla.visualize.expression
flotilla.visualize.generic
flotilla.visualize.ipython_interact
flotilla.visualize.network
flotilla.visualize.predict
flotilla.visualize.splicing
Olga B. Botvinnik
is funded by the
NDSEG
fellowship and is a
NumFOCUS
John Hunter Technology Fellow
.
Michael T. Lovci was partially funded by a fellowship from
Genentech
. Partially funded by
NIH
grants NS075449 and HG004659 and
CIRM
grants RB4-06045 and TR3-05676 to
Gene Yeo
.